Cluster: Rep_2752_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2752
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2752_c_161 | Rep_2752_c_161_4 | 1410 | 2156 | - | 9.B.14.2.1 |
| pfam | Rep_2752_c_161 | Rep_2752_c_161_5 | 2156 | 2833 | - | CcmB |
| TC | Rep_2752_c_161 | Rep_2752_c_161_6 | 2827 | 3543 | - | 3.A.1.105.7 |
| TC | Rep_2752_c_161 | Rep_2752_c_161_7 | 3556 | 5787 | - | 9.B.14.1.1 |
| pfam | Rep_2752_c_161 | Rep_2752_c_161_8 | 6094 | 6507 | - | CcmE |
| pfam | Rep_2752_c_161 | Rep_2752_c_161_9 | 6899 | 7507 | + | Hydrolase | PNK3P | Hydrolase_like | HAD_2 |
| CAZyme | Rep_2752_c_161 | Rep_2752_c_161_10 | 7510 | 8556 | + | GT9 |
Gene ID: Rep_2752_c_161_4
Type: TC
Location: 1410 - 2156 (-)
Type: TC
Location: 1410 - 2156 (-)
Gene ID: Rep_2752_c_161_5
Type: pfam
Location: 2156 - 2833 (-)
Type: pfam
Location: 2156 - 2833 (-)
Gene ID: Rep_2752_c_161_6
Type: TC
Location: 2827 - 3543 (-)
Type: TC
Location: 2827 - 3543 (-)
Gene ID: Rep_2752_c_161_7
Type: TC
Location: 3556 - 5787 (-)
Type: TC
Location: 3556 - 5787 (-)
Gene ID: Rep_2752_c_161_8
Type: pfam
Location: 6094 - 6507 (-)
Type: pfam
Location: 6094 - 6507 (-)
Gene ID: Rep_2752_c_161_9
Type: pfam
Location: 6899 - 7507 (+)
Type: pfam
Location: 6899 - 7507 (+)
Gene ID: Rep_2752_c_161_10
Type: CAZyme
Location: 7510 - 8556 (+)
Type: CAZyme
Location: 7510 - 8556 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Frigididesulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.