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Cluster: Rep_2718_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2718_c_0 Rep_2718_c_0_1399 1502335 1502961 + 9.B.18.1.1
CAZyme Rep_2718_c_0 Rep_2718_c_0_1400 1502958 1504055 + GT4
pfam Rep_2718_c_0 Rep_2718_c_0_1401 1504058 1505215 + EpsG
CAZyme Rep_2718_c_0 Rep_2718_c_0_1402 1505236 1506297 + GT2
CAZyme Rep_2718_c_0 Rep_2718_c_0_1403 1506309 1507127 + GT2
CAZyme Rep_2718_c_0 Rep_2718_c_0_1404 1507082 1508143 + GT2
CAZyme Rep_2718_c_0 Rep_2718_c_0_1405 1508156 1509265 + GT4
CAZyme Rep_2718_c_0 Rep_2718_c_0_1406 1509272 1510261 + GT2
CAZyme Rep_2718_c_0 Rep_2718_c_0_1407 1510274 1511242 + GT2
CAZyme Rep_2718_c_0 Rep_2718_c_0_1408 1511264 1512127 + GT2
pfam Rep_2718_c_0 Rep_2718_c_0_1409 1512141 1513298 + PS_pyruv_trans
CAZyme Rep_2718_c_0 Rep_2718_c_0_1410 1513295 1514446 + GH105
TC Rep_2718_c_0 Rep_2718_c_0_1411 1514461 1515996 + 2.A.66.1.40
pfam Rep_2718_c_0 Rep_2718_c_0_1412 1516150 1517163 + Acyl_transf_3
pfam Rep_2718_c_0 Rep_2718_c_0_1413 1517397 1518476 + Epimerase_2
CAZyme Rep_2718_c_0 Rep_2718_c_0_1414 1518563 1519456 + GT14
Gene ID: Rep_2718_c_0_1399
Type: TC
Location: 1502335 - 1502961 (+)
Gene ID: Rep_2718_c_0_1400
Type: CAZyme
Location: 1502958 - 1504055 (+)
Gene ID: Rep_2718_c_0_1401
Type: pfam
Location: 1504058 - 1505215 (+)
Gene ID: Rep_2718_c_0_1402
Type: CAZyme
Location: 1505236 - 1506297 (+)
Gene ID: Rep_2718_c_0_1403
Type: CAZyme
Location: 1506309 - 1507127 (+)
Gene ID: Rep_2718_c_0_1404
Type: CAZyme
Location: 1507082 - 1508143 (+)
Gene ID: Rep_2718_c_0_1405
Type: CAZyme
Location: 1508156 - 1509265 (+)
Gene ID: Rep_2718_c_0_1406
Type: CAZyme
Location: 1509272 - 1510261 (+)
Gene ID: Rep_2718_c_0_1407
Type: CAZyme
Location: 1510274 - 1511242 (+)
Gene ID: Rep_2718_c_0_1408
Type: CAZyme
Location: 1511264 - 1512127 (+)
Gene ID: Rep_2718_c_0_1409
Type: pfam
Location: 1512141 - 1513298 (+)
Gene ID: Rep_2718_c_0_1410
Type: CAZyme
Location: 1513295 - 1514446 (+)
Gene ID: Rep_2718_c_0_1411
Type: TC
Location: 1514461 - 1515996 (+)
Gene ID: Rep_2718_c_0_1412
Type: pfam
Location: 1516150 - 1517163 (+)
Gene ID: Rep_2718_c_0_1413
Type: pfam
Location: 1517397 - 1518476 (+)
Gene ID: Rep_2718_c_0_1414
Type: CAZyme
Location: 1518563 - 1519456 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
CAG-138
→
Genus
Phil1
→
Species
Phil1 sp001940855

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2718_c_0_1403 vegetarian > vegan 1.40558 0.03299
Rep_2718_c_0_1410 vegetarian > vegan 1.50929 0.00180

🧭 Explore Read Mapping of CGC

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