Cluster: Rep_2718_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2718
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2718_c_0 | Rep_2718_c_0_1348 | 1442633 | 1446367 | + | GT39 |
| pfam | Rep_2718_c_0 | Rep_2718_c_0_1349 | 1446391 | 1446870 | + | GtrA_DPMS_TM |
| peptidase | Rep_2718_c_0 | Rep_2718_c_0_1350 | 1446902 | 1448437 | + | S16.UNW |
| TC | Rep_2718_c_0 | Rep_2718_c_0_1351 | 1448434 | 1449546 | + | 3.A.11.1.3 |
Gene ID: Rep_2718_c_0_1348
Type: CAZyme
Location: 1442633 - 1446367 (+)
Type: CAZyme
Location: 1442633 - 1446367 (+)
Gene ID: Rep_2718_c_0_1349
Type: pfam
Location: 1446391 - 1446870 (+)
Type: pfam
Location: 1446391 - 1446870 (+)
Gene ID: Rep_2718_c_0_1350
Type: peptidase
Location: 1446902 - 1448437 (+)
Type: peptidase
Location: 1446902 - 1448437 (+)
Gene ID: Rep_2718_c_0_1351
Type: TC
Location: 1448434 - 1449546 (+)
Type: TC
Location: 1448434 - 1449546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Phil1
Species
Phil1 sp001940855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2718_c_0_1348 | vegan > omnivore | 1.28256 | 0.00937 |
| Rep_2718_c_0_1349 | vegan > omnivore | 2.76228 | 0.00937 |
| Rep_2718_c_0_1350 | vegan > omnivore | 1.83261 | 0.00937 |
| Rep_2718_c_0_1351 | vegan > omnivore | 2.38173 | 0.00937 |