Cluster: Rep_2718_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2718
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2718_c_0 | Rep_2718_c_0_1114 | 1207296 | 1207964 | + | 3.A.1.122.14 |
| pfam | Rep_2718_c_0 | Rep_2718_c_0_1115 | 1208217 | 1208942 | + | CutC |
| CAZyme | Rep_2718_c_0 | Rep_2718_c_0_1116 | 1208929 | 1210236 | + | GH29 |
| pfam | Rep_2718_c_0 | Rep_2718_c_0_1117 | 1210242 | 1212569 | + | Transglut_core |
| NULL(UNKNOWN) | Rep_2718_c_0 | Rep_2718_c_0_1118 | 1212561 | 1212674 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2718_c_0 | Rep_2718_c_0_1119 | 1213058 | 1214791 | + | 3.A.1.135.7 |
| TC | Rep_2718_c_0 | Rep_2718_c_0_1120 | 1214784 | 1216532 | + | 3.A.1.135.5 |
Gene ID: Rep_2718_c_0_1114
Type: TC
Location: 1207296 - 1207964 (+)
Type: TC
Location: 1207296 - 1207964 (+)
Gene ID: Rep_2718_c_0_1115
Type: pfam
Location: 1208217 - 1208942 (+)
Type: pfam
Location: 1208217 - 1208942 (+)
Gene ID: Rep_2718_c_0_1116
Type: CAZyme
Location: 1208929 - 1210236 (+)
Type: CAZyme
Location: 1208929 - 1210236 (+)
Gene ID: Rep_2718_c_0_1117
Type: pfam
Location: 1210242 - 1212569 (+)
Type: pfam
Location: 1210242 - 1212569 (+)
Gene ID: Rep_2718_c_0_1118
Type:
Location: 1212561 - 1212674 (-)
Type:
Location: 1212561 - 1212674 (-)
Gene ID: Rep_2718_c_0_1119
Type: TC
Location: 1213058 - 1214791 (+)
Type: TC
Location: 1213058 - 1214791 (+)
Gene ID: Rep_2718_c_0_1120
Type: TC
Location: 1214784 - 1216532 (+)
Type: TC
Location: 1214784 - 1216532 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Phil1
Species
Phil1 sp001940855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2718_c_0_1115 | vegan > omnivore | 2.67872 | 0.00937 |
| Rep_2718_c_0_1116 | vegan > omnivore | 2.41142 | 0.00937 |
| Rep_2718_c_0_1117 | vegan > omnivore | 2.20423 | 0.00937 |
| Rep_2718_c_0_1119 | vegan > omnivore | 1.87390 | 0.00937 |
| Rep_2718_c_0_1119 | vegetarian > omnivore | 1.68836 | 0.02745 |