dbCAN HGM

Cluster: Rep_2718_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2718_c_0	Rep_2718_c_0_1040	1116379	1124133	+	GH94 \| GT84
pfam	Rep_2718_c_0	Rep_2718_c_0_1041	1124138	1126084	+	Radical_SAM_N \| DUF3362
TC	Rep_2718_c_0	Rep_2718_c_0_1042	1126263	1126751	+	3.D.1.5.1
STP	Rep_2718_c_0	Rep_2718_c_0_1043	1126764	1127306	+	HATPase_c
NULL(UNKNOWN)	Rep_2718_c_0	Rep_2718_c_0_1044	1127303	1127674	+	NULL(UNKNOWN) [View Structural Homologs]
TC	Rep_2718_c_0	Rep_2718_c_0_1045	1127699	1129495	+	3.D.1.5.1

Gene ID: Rep_2718_c_0_1040
Type: CAZyme
Location: 1116379 - 1124133 (+)

Gene ID: Rep_2718_c_0_1041
Type: pfam
Location: 1124138 - 1126084 (+)

Gene ID: Rep_2718_c_0_1042
Type: TC
Location: 1126263 - 1126751 (+)

Gene ID: Rep_2718_c_0_1043
Type: STP
Location: 1126764 - 1127306 (+)

Gene ID: Rep_2718_c_0_1044
Type:
Location: 1127303 - 1127674 (+)

Gene ID: Rep_2718_c_0_1045
Type: TC
Location: 1127699 - 1129495 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2718_c_0_1040	vegan > omnivore	2.34316	0.00937
Rep_2718_c_0_1042	vegan > omnivore	2.78354	0.00937
Rep_2718_c_0_1043	vegan > omnivore	2.36209	0.00937
Rep_2718_c_0_1044	vegan > omnivore	1.65882	0.00937