Cluster: Rep_2718_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2718
- CGC Family ID: CGCFAM_09339
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2718_c_2 | Rep_2718_c_2_222 | 225851 | 227092 | + | GT4 |
| pfam | Rep_2718_c_2 | Rep_2718_c_2_223 | 227150 | 227905 | - | DUF218 |
| TC | Rep_2718_c_2 | Rep_2718_c_2_224 | 227905 | 228846 | - | 2.A.7.3.28 |
| NULL(UNKNOWN) | Rep_2718_c_2 | Rep_2718_c_2_225 | 228914 | 229249 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2718_c_2 | Rep_2718_c_2_226 | 229523 | 232252 | + | 3.A.5.2.2 |
Gene ID: Rep_2718_c_2_222
Type: CAZyme
Location: 225851 - 227092 (+)
Type: CAZyme
Location: 225851 - 227092 (+)
Gene ID: Rep_2718_c_2_223
Type: pfam
Location: 227150 - 227905 (-)
Type: pfam
Location: 227150 - 227905 (-)
Gene ID: Rep_2718_c_2_224
Type: TC
Location: 227905 - 228846 (-)
Type: TC
Location: 227905 - 228846 (-)
Gene ID: Rep_2718_c_2_225
Type:
Location: 228914 - 229249 (-)
Type:
Location: 228914 - 229249 (-)
Gene ID: Rep_2718_c_2_226
Type: TC
Location: 229523 - 232252 (+)
Type: TC
Location: 229523 - 232252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Phil1
Species
Phil1 sp001940855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2718_c_2_222 | vegan > omnivore | 1.68647 | 0.00937 |
| Rep_2718_c_2_223 | vegan > omnivore | 2.28299 | 0.00937 |
| Rep_2718_c_2_224 | vegan > omnivore | 2.66355 | 0.00937 |
| Rep_2718_c_2_225 | vegan > omnivore | 2.44524 | 0.00937 |