Cluster: Rep_2718_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2718
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2718_c_0 | Rep_2718_c_0_1618 | 1740712 | 1742307 | - | 9.A.11.1.2 |
| pfam | Rep_2718_c_0 | Rep_2718_c_0_1619 | 1742393 | 1743550 | - | PG_binding_1 | SH3_4 | SH3_3 | SH3_16 |
| pfam | Rep_2718_c_0 | Rep_2718_c_0_1620 | 1743547 | 1744161 | - | UDG |
| CAZyme | Rep_2718_c_0 | Rep_2718_c_0_1621 | 1744154 | 1746946 | - | GT51 |
Gene ID: Rep_2718_c_0_1618
Type: TC
Location: 1740712 - 1742307 (-)
Type: TC
Location: 1740712 - 1742307 (-)
Gene ID: Rep_2718_c_0_1619
Type: pfam
Location: 1742393 - 1743550 (-)
Type: pfam
Location: 1742393 - 1743550 (-)
Gene ID: Rep_2718_c_0_1620
Type: pfam
Location: 1743547 - 1744161 (-)
Type: pfam
Location: 1743547 - 1744161 (-)
Gene ID: Rep_2718_c_0_1621
Type: CAZyme
Location: 1744154 - 1746946 (-)
Type: CAZyme
Location: 1744154 - 1746946 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Phil1
Species
Phil1 sp001940855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2718_c_0_1618 | vegan > omnivore | 1.76462 | 0.00937 |
| Rep_2718_c_0_1620 | vegan > omnivore | 2.40220 | 0.00937 |
| Rep_2718_c_0_1621 | vegan > omnivore | 2.36676 | 0.00937 |