Cluster: Rep_2697_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2697
- CGC Family ID: CGCFAM_00211
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2697_c_32 | Rep_2697_c_32_4 | 3184 | 4551 | - | GH32 |
| TC | Rep_2697_c_32 | Rep_2697_c_32_5 | 4541 | 6487 | - | 4.A.1.2.12 |
| pfam | Rep_2697_c_32 | Rep_2697_c_32_6 | 6658 | 6927 | - | Ribosomal_S18 |
| TC | Rep_2697_c_32 | Rep_2697_c_32_7 | 6947 | 7399 | - | 3.A.7.19.1 |
Gene ID: Rep_2697_c_32_4
Type: CAZyme
Location: 3184 - 4551 (-)
Type: CAZyme
Location: 3184 - 4551 (-)
Gene ID: Rep_2697_c_32_5
Type: TC
Location: 4541 - 6487 (-)
Type: TC
Location: 4541 - 6487 (-)
Gene ID: Rep_2697_c_32_6
Type: pfam
Location: 6658 - 6927 (-)
Type: pfam
Location: 6658 - 6927 (-)
Gene ID: Rep_2697_c_32_7
Type: TC
Location: 6947 - 7399 (-)
Type: TC
Location: 6947 - 7399 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Johnsonella
Species
Johnsonella sp900766185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.