Cluster: Rep_2697_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2697
- CGC Family ID: CGCFAM_00210
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2697_c_21 | Rep_2697_c_21_4 | 5659 | 6354 | + | 9.B.27.1.1 |
| pfam | Rep_2697_c_21 | Rep_2697_c_21_5 | 6335 | 7345 | + | CCG | CCG |
| TC | Rep_2697_c_21 | Rep_2697_c_21_6 | 7362 | 8066 | + | 9.B.27.1.2 |
| CAZyme | Rep_2697_c_21 | Rep_2697_c_21_7 | 8253 | 9605 | + | GT2 |
Gene ID: Rep_2697_c_21_4
Type: TC
Location: 5659 - 6354 (+)
Type: TC
Location: 5659 - 6354 (+)
Gene ID: Rep_2697_c_21_5
Type: pfam
Location: 6335 - 7345 (+)
Type: pfam
Location: 6335 - 7345 (+)
Gene ID: Rep_2697_c_21_6
Type: TC
Location: 7362 - 8066 (+)
Type: TC
Location: 7362 - 8066 (+)
Gene ID: Rep_2697_c_21_7
Type: CAZyme
Location: 8253 - 9605 (+)
Type: CAZyme
Location: 8253 - 9605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Johnsonella
Species
Johnsonella sp900766185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.