Cluster: Rep_2697_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2697
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2697_c_18 | Rep_2697_c_18_19 | 22295 | 23311 | + | GH177 |
| TF | Rep_2697_c_18 | Rep_2697_c_18_20 | 23474 | 24238 | + | HTH_DeoR |
| pfam | Rep_2697_c_18 | Rep_2697_c_18_21 | 24254 | 25009 | + | KduI |
| TC | Rep_2697_c_18 | Rep_2697_c_18_22 | 25438 | 26436 | + | 2.A.56.1.9 |
| pfam | Rep_2697_c_18 | Rep_2697_c_18_23 | 26524 | 27009 | + | DctQ |
| TC | Rep_2697_c_18 | Rep_2697_c_18_24 | 27011 | 28294 | + | 2.A.56.1.1 |
Gene ID: Rep_2697_c_18_19
Type: CAZyme
Location: 22295 - 23311 (+)
Type: CAZyme
Location: 22295 - 23311 (+)
Gene ID: Rep_2697_c_18_20
Type: TF
Location: 23474 - 24238 (+)
Type: TF
Location: 23474 - 24238 (+)
Gene ID: Rep_2697_c_18_21
Type: pfam
Location: 24254 - 25009 (+)
Type: pfam
Location: 24254 - 25009 (+)
Gene ID: Rep_2697_c_18_22
Type: TC
Location: 25438 - 26436 (+)
Type: TC
Location: 25438 - 26436 (+)
Gene ID: Rep_2697_c_18_23
Type: pfam
Location: 26524 - 27009 (+)
Type: pfam
Location: 26524 - 27009 (+)
Gene ID: Rep_2697_c_18_24
Type: TC
Location: 27011 - 28294 (+)
Type: TC
Location: 27011 - 28294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Johnsonella
Species
Johnsonella sp900766185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.