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Cluster: Rep_2697_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2697_c_18 Rep_2697_c_18_2 172 1485 + GH13_20
STP Rep_2697_c_18 Rep_2697_c_18_3 1669 3006 + Pyr_redox_2
pfam Rep_2697_c_18 Rep_2697_c_18_4 3436 4146 + DUF3800
CAZyme Rep_2697_c_18 Rep_2697_c_18_5 4398 5537 + CE9
pfam Rep_2697_c_18 Rep_2697_c_18_6 5609 6907 + GatZ_KbaZ-like
TC Rep_2697_c_18 Rep_2697_c_18_7 7468 7902 + 4.A.6.3.1
pfam Rep_2697_c_18 Rep_2697_c_18_8 7996 9774 + E1_dh | Transket_pyr | Transketolase_C | DXP_synthase_N | DXP_synthase_N
pfam Rep_2697_c_18 Rep_2697_c_18_9 10042 10536 - Choline_bind_1 | Choline_bind_2 | Choline_bind_3
TC Rep_2697_c_18 Rep_2697_c_18_10 10843 11319 - 4.A.6.1.4
pfam Rep_2697_c_18 Rep_2697_c_18_11 12137 13027 + AP_endonuc_2
TC Rep_2697_c_18 Rep_2697_c_18_12 13065 14105 + 3.A.1.2.15
TC Rep_2697_c_18 Rep_2697_c_18_13 14186 15706 + 3.A.1.2.3
TC Rep_2697_c_18 Rep_2697_c_18_14 15703 16722 + 3.A.1.2.15
CAZyme Rep_2697_c_18 Rep_2697_c_18_15 16732 17754 + GH177
Gene ID: Rep_2697_c_18_2
Type: CAZyme
Location: 172 - 1485 (+)
Gene ID: Rep_2697_c_18_3
Type: STP
Location: 1669 - 3006 (+)
Gene ID: Rep_2697_c_18_4
Type: pfam
Location: 3436 - 4146 (+)
Gene ID: Rep_2697_c_18_5
Type: CAZyme
Location: 4398 - 5537 (+)
Gene ID: Rep_2697_c_18_6
Type: pfam
Location: 5609 - 6907 (+)
Gene ID: Rep_2697_c_18_7
Type: TC
Location: 7468 - 7902 (+)
Gene ID: Rep_2697_c_18_8
Type: pfam
Location: 7996 - 9774 (+)
Gene ID: Rep_2697_c_18_9
Type: pfam
Location: 10042 - 10536 (-)
Gene ID: Rep_2697_c_18_10
Type: TC
Location: 10843 - 11319 (-)
Gene ID: Rep_2697_c_18_11
Type: pfam
Location: 12137 - 13027 (+)
Gene ID: Rep_2697_c_18_12
Type: TC
Location: 13065 - 14105 (+)
Gene ID: Rep_2697_c_18_13
Type: TC
Location: 14186 - 15706 (+)
Gene ID: Rep_2697_c_18_14
Type: TC
Location: 15703 - 16722 (+)
Gene ID: Rep_2697_c_18_15
Type: CAZyme
Location: 16732 - 17754 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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