Cluster: Rep_2697_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2697
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2697_c_4 | Rep_2697_c_4_18 | 19712 | 21379 | + | GH18 |
| TC | Rep_2697_c_4 | Rep_2697_c_4_19 | 21823 | 23388 | + | 3.A.1.5.20 |
| TC | Rep_2697_c_4 | Rep_2697_c_4_20 | 23454 | 24368 | + | 3.A.1.5.39 |
| TC | Rep_2697_c_4 | Rep_2697_c_4_21 | 24368 | 25153 | + | 3.A.1.5.38 |
| TC | Rep_2697_c_4 | Rep_2697_c_4_22 | 25154 | 26737 | + | 3.A.1.5.23 |
Gene ID: Rep_2697_c_4_18
Type: CAZyme
Location: 19712 - 21379 (+)
Type: CAZyme
Location: 19712 - 21379 (+)
Gene ID: Rep_2697_c_4_19
Type: TC
Location: 21823 - 23388 (+)
Type: TC
Location: 21823 - 23388 (+)
Gene ID: Rep_2697_c_4_20
Type: TC
Location: 23454 - 24368 (+)
Type: TC
Location: 23454 - 24368 (+)
Gene ID: Rep_2697_c_4_21
Type: TC
Location: 24368 - 25153 (+)
Type: TC
Location: 24368 - 25153 (+)
Gene ID: Rep_2697_c_4_22
Type: TC
Location: 25154 - 26737 (+)
Type: TC
Location: 25154 - 26737 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Johnsonella
Species
Johnsonella sp900766185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.