dbCAN Logo

Cluster: Rep_2697_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2697_c_4 Rep_2697_c_4_2 848 1660 + 3.A.1.104.1
TC Rep_2697_c_4 Rep_2697_c_4_3 1670 2959 + 3.A.1.103.6
TC Rep_2697_c_4 Rep_2697_c_4_4 3174 4286 + 3.D.2.2.1
TC Rep_2697_c_4 Rep_2697_c_4_5 4386 5498 + 3.A.1.14.5
TC Rep_2697_c_4 Rep_2697_c_4_6 5562 6314 + 3.A.1.14.10
STP Rep_2697_c_4 Rep_2697_c_4_7 6326 7486 + Peripla_BP_2
pfam Rep_2697_c_4 Rep_2697_c_4_8 7476 8297 + MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme Rep_2697_c_4 Rep_2697_c_4_9 8436 10190 - GH25
Gene ID: Rep_2697_c_4_2
Type: TC
Location: 848 - 1660 (+)
Gene ID: Rep_2697_c_4_3
Type: TC
Location: 1670 - 2959 (+)
Gene ID: Rep_2697_c_4_4
Type: TC
Location: 3174 - 4286 (+)
Gene ID: Rep_2697_c_4_5
Type: TC
Location: 4386 - 5498 (+)
Gene ID: Rep_2697_c_4_6
Type: TC
Location: 5562 - 6314 (+)
Gene ID: Rep_2697_c_4_7
Type: STP
Location: 6326 - 7486 (+)
Gene ID: Rep_2697_c_4_8
Type: pfam
Location: 7476 - 8297 (+)
Gene ID: Rep_2697_c_4_9
Type: CAZyme
Location: 8436 - 10190 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List