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Cluster: Rep_2697_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2697_c_89 Rep_2697_c_89_4 1556 2950 + 3.A.1.31.2
TC Rep_2697_c_89 Rep_2697_c_89_5 3143 4471 + 2.A.66.1.37
pfam Rep_2697_c_89 Rep_2697_c_89_6 4475 4975 + DSBA
peptidase Rep_2697_c_89 Rep_2697_c_89_7 5160 5723 - S26.UPA
CAZyme Rep_2697_c_89 Rep_2697_c_89_8 6122 8368 + GH13_9
TC Rep_2697_c_89 Rep_2697_c_89_9 8368 9318 + 1.A.23.2.2
CAZyme Rep_2697_c_89 Rep_2697_c_89_10 9337 10875 + GH77
Gene ID: Rep_2697_c_89_4
Type: TC
Location: 1556 - 2950 (+)
Gene ID: Rep_2697_c_89_5
Type: TC
Location: 3143 - 4471 (+)
Gene ID: Rep_2697_c_89_6
Type: pfam
Location: 4475 - 4975 (+)
Gene ID: Rep_2697_c_89_7
Type: peptidase
Location: 5160 - 5723 (-)
Gene ID: Rep_2697_c_89_8
Type: CAZyme
Location: 6122 - 8368 (+)
Gene ID: Rep_2697_c_89_9
Type: TC
Location: 8368 - 9318 (+)
Gene ID: Rep_2697_c_89_10
Type: CAZyme
Location: 9337 - 10875 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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