Cluster: Rep_2697_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2697
- CGC Family ID: CGCFAM_00262
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2697_c_88 | Rep_2697_c_88_18 | 19112 | 20296 | + | CE4 |
| TC | Rep_2697_c_88 | Rep_2697_c_88_19 | 20417 | 22054 | + | 3.A.1.121.4 |
| pfam | Rep_2697_c_88 | Rep_2697_c_88_20 | 22076 | 22834 | + | Exo_endo_phos |
| pfam | Rep_2697_c_88 | Rep_2697_c_88_21 | 22838 | 23200 | + | YjbR |
| CAZyme | Rep_2697_c_88 | Rep_2697_c_88_22 | 23291 | 25153 | + | GH13_11 |
Gene ID: Rep_2697_c_88_18
Type: CAZyme
Location: 19112 - 20296 (+)
Type: CAZyme
Location: 19112 - 20296 (+)
Gene ID: Rep_2697_c_88_19
Type: TC
Location: 20417 - 22054 (+)
Type: TC
Location: 20417 - 22054 (+)
Gene ID: Rep_2697_c_88_20
Type: pfam
Location: 22076 - 22834 (+)
Type: pfam
Location: 22076 - 22834 (+)
Gene ID: Rep_2697_c_88_21
Type: pfam
Location: 22838 - 23200 (+)
Type: pfam
Location: 22838 - 23200 (+)
Gene ID: Rep_2697_c_88_22
Type: CAZyme
Location: 23291 - 25153 (+)
Type: CAZyme
Location: 23291 - 25153 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Johnsonella
Species
Johnsonella sp900766185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.