Cluster: Rep_2697_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2697
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2697_c_54 | Rep_2697_c_54_1 | 562 | 1911 | + | 3.A.1.1.45 |
| TC | Rep_2697_c_54 | Rep_2697_c_54_2 | 2206 | 3048 | + | 3.A.1.1.45 |
| TC | Rep_2697_c_54 | Rep_2697_c_54_3 | 3048 | 3893 | + | 3.A.1.1.45 |
| TF | Rep_2697_c_54 | Rep_2697_c_54_4 | 3909 | 4925 | + | LacI |
| CAZyme | Rep_2697_c_54 | Rep_2697_c_54_5 | 4960 | 6414 | + | GH77 |
Gene ID: Rep_2697_c_54_1
Type: TC
Location: 562 - 1911 (+)
Type: TC
Location: 562 - 1911 (+)
Gene ID: Rep_2697_c_54_2
Type: TC
Location: 2206 - 3048 (+)
Type: TC
Location: 2206 - 3048 (+)
Gene ID: Rep_2697_c_54_3
Type: TC
Location: 3048 - 3893 (+)
Type: TC
Location: 3048 - 3893 (+)
Gene ID: Rep_2697_c_54_4
Type: TF
Location: 3909 - 4925 (+)
Type: TF
Location: 3909 - 4925 (+)
Gene ID: Rep_2697_c_54_5
Type: CAZyme
Location: 4960 - 6414 (+)
Type: CAZyme
Location: 4960 - 6414 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Johnsonella
Species
Johnsonella sp900766185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.