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Cluster: Rep_2697_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2697_c_43 Rep_2697_c_43_7 8204 9187 + GT8
pfam Rep_2697_c_43 Rep_2697_c_43_8 9175 10074 + Glycos_transf_2
CAZyme Rep_2697_c_43 Rep_2697_c_43_9 10133 11056 + GT2
TC Rep_2697_c_43 Rep_2697_c_43_10 11070 12512 + 2.A.66.2.6
NULL(UNKNOWN) Rep_2697_c_43 Rep_2697_c_43_11 12524 13765 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2697_c_43 Rep_2697_c_43_12 13824 14771 + GT2
CAZyme Rep_2697_c_43 Rep_2697_c_43_13 14761 15477 + GT2
pfam Rep_2697_c_43 Rep_2697_c_43_14 15487 15828 + DUF2304
pfam Rep_2697_c_43 Rep_2697_c_43_15 15855 17444 + DUF2142
CAZyme Rep_2697_c_43 Rep_2697_c_43_16 17462 21229 + GT27
Gene ID: Rep_2697_c_43_7
Type: CAZyme
Location: 8204 - 9187 (+)
Gene ID: Rep_2697_c_43_8
Type: pfam
Location: 9175 - 10074 (+)
Gene ID: Rep_2697_c_43_9
Type: CAZyme
Location: 10133 - 11056 (+)
Gene ID: Rep_2697_c_43_10
Type: TC
Location: 11070 - 12512 (+)
Gene ID: Rep_2697_c_43_11
Type:
Location: 12524 - 13765 (+)
Gene ID: Rep_2697_c_43_12
Type: CAZyme
Location: 13824 - 14771 (+)
Gene ID: Rep_2697_c_43_13
Type: CAZyme
Location: 14761 - 15477 (+)
Gene ID: Rep_2697_c_43_14
Type: pfam
Location: 15487 - 15828 (+)
Gene ID: Rep_2697_c_43_15
Type: pfam
Location: 15855 - 17444 (+)
Gene ID: Rep_2697_c_43_16
Type: CAZyme
Location: 17462 - 21229 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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