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Cluster: Rep_2697_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2697_c_1 Rep_2697_c_1_2 3766 6213 + GT35
pfam Rep_2697_c_1 Rep_2697_c_1_3 6476 6781 + RelB
pfam Rep_2697_c_1 Rep_2697_c_1_4 6778 7110 + ParE_toxin
TC Rep_2697_c_1 Rep_2697_c_1_5 7512 8156 + 3.A.1.3.16
TC Rep_2697_c_1 Rep_2697_c_1_6 8137 8814 + 3.A.1.3.25
TC Rep_2697_c_1 Rep_2697_c_1_7 8837 9604 + 3.A.1.3.15
TC Rep_2697_c_1 Rep_2697_c_1_8 9681 10550 + 3.A.1.3.10
Gene ID: Rep_2697_c_1_2
Type: CAZyme
Location: 3766 - 6213 (+)
Gene ID: Rep_2697_c_1_3
Type: pfam
Location: 6476 - 6781 (+)
Gene ID: Rep_2697_c_1_4
Type: pfam
Location: 6778 - 7110 (+)
Gene ID: Rep_2697_c_1_5
Type: TC
Location: 7512 - 8156 (+)
Gene ID: Rep_2697_c_1_6
Type: TC
Location: 8137 - 8814 (+)
Gene ID: Rep_2697_c_1_7
Type: TC
Location: 8837 - 9604 (+)
Gene ID: Rep_2697_c_1_8
Type: TC
Location: 9681 - 10550 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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