Cluster: Rep_2696_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2696
- CGC Family ID: CGCFAM_04194
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2696_c_28 | Rep_2696_c_28_7 | 5992 | 7638 | + | 2.A.53.3.11 |
| pfam | Rep_2696_c_28 | Rep_2696_c_28_8 | 7690 | 8316 | + | LUD_dom |
| STP | Rep_2696_c_28 | Rep_2696_c_28_9 | 8553 | 9887 | + | SBP_bac_1 |
| TC | Rep_2696_c_28 | Rep_2696_c_28_10 | 9954 | 10859 | + | 3.A.1.1.20 |
| TC | Rep_2696_c_28 | Rep_2696_c_28_11 | 10868 | 11713 | + | 3.A.1.1.20 |
| TF | Rep_2696_c_28 | Rep_2696_c_28_12 | 11745 | 12728 | + | LacI |
| CAZyme | Rep_2696_c_28 | Rep_2696_c_28_13 | 12748 | 14181 | + | GH32 |
Gene ID: Rep_2696_c_28_7
Type: TC
Location: 5992 - 7638 (+)
Type: TC
Location: 5992 - 7638 (+)
Gene ID: Rep_2696_c_28_8
Type: pfam
Location: 7690 - 8316 (+)
Type: pfam
Location: 7690 - 8316 (+)
Gene ID: Rep_2696_c_28_9
Type: STP
Location: 8553 - 9887 (+)
Type: STP
Location: 8553 - 9887 (+)
Gene ID: Rep_2696_c_28_10
Type: TC
Location: 9954 - 10859 (+)
Type: TC
Location: 9954 - 10859 (+)
Gene ID: Rep_2696_c_28_11
Type: TC
Location: 10868 - 11713 (+)
Type: TC
Location: 10868 - 11713 (+)
Gene ID: Rep_2696_c_28_12
Type: TF
Location: 11745 - 12728 (+)
Type: TF
Location: 11745 - 12728 (+)
Gene ID: Rep_2696_c_28_13
Type: CAZyme
Location: 12748 - 14181 (+)
Type: CAZyme
Location: 12748 - 14181 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum sp000296385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.