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Cluster: Rep_2696_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2696_c_229 Rep_2696_c_229_2 300 2066 + 3.A.2.3.1
TC Rep_2696_c_229 Rep_2696_c_229_3 2078 3505 + 3.A.2.3.3
TC Rep_2696_c_229 Rep_2696_c_229_4 3508 4125 + 3.A.2.3.2
pfam Rep_2696_c_229 Rep_2696_c_229_5 4125 4811 + Lit
CAZyme Rep_2696_c_229 Rep_2696_c_229_6 4928 6604 + GH13_31
pfam Rep_2696_c_229 Rep_2696_c_229_7 6828 7088 - PhdYeFM_antitox
CAZyme Rep_2696_c_229 Rep_2696_c_229_8 7095 8588 - GH77
TC Rep_2696_c_229 Rep_2696_c_229_9 8665 9525 - 3.A.1.1.45
TC Rep_2696_c_229 Rep_2696_c_229_10 9525 10562 - 3.A.1.1.45
TC Rep_2696_c_229 Rep_2696_c_229_11 10687 12039 - 3.A.1.1.45
CAZyme Rep_2696_c_229 Rep_2696_c_229_12 12096 13760 - GH13_31
TC Rep_2696_c_229 Rep_2696_c_229_13 14006 15118 + 3.A.1.1.26
TF Rep_2696_c_229 Rep_2696_c_229_14 15207 16067 + 0037176
NULL(UNKNOWN) Rep_2696_c_229 Rep_2696_c_229_15 16060 16548 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2696_c_229 Rep_2696_c_229_16 16596 18545 - 4.A.1.2.1
Gene ID: Rep_2696_c_229_2
Type: TC
Location: 300 - 2066 (+)
Gene ID: Rep_2696_c_229_3
Type: TC
Location: 2078 - 3505 (+)
Gene ID: Rep_2696_c_229_4
Type: TC
Location: 3508 - 4125 (+)
Gene ID: Rep_2696_c_229_5
Type: pfam
Location: 4125 - 4811 (+)
Gene ID: Rep_2696_c_229_6
Type: CAZyme
Location: 4928 - 6604 (+)
Gene ID: Rep_2696_c_229_7
Type: pfam
Location: 6828 - 7088 (-)
Gene ID: Rep_2696_c_229_8
Type: CAZyme
Location: 7095 - 8588 (-)
Gene ID: Rep_2696_c_229_9
Type: TC
Location: 8665 - 9525 (-)
Gene ID: Rep_2696_c_229_10
Type: TC
Location: 9525 - 10562 (-)
Gene ID: Rep_2696_c_229_11
Type: TC
Location: 10687 - 12039 (-)
Gene ID: Rep_2696_c_229_12
Type: CAZyme
Location: 12096 - 13760 (-)
Gene ID: Rep_2696_c_229_13
Type: TC
Location: 14006 - 15118 (+)
Gene ID: Rep_2696_c_229_14
Type: TF
Location: 15207 - 16067 (+)
Gene ID: Rep_2696_c_229_15
Type:
Location: 16060 - 16548 (+)
Gene ID: Rep_2696_c_229_16
Type: TC
Location: 16596 - 18545 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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