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Cluster: Rep_2696_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2696_c_2 Rep_2696_c_2_8 7565 9277 - PL33
TC Rep_2696_c_2 Rep_2696_c_2_9 9281 10162 - 3.A.1.1.10
TC Rep_2696_c_2 Rep_2696_c_2_10 10172 11140 - 3.A.1.1.10
TC Rep_2696_c_2 Rep_2696_c_2_11 11147 12727 - 3.A.1.1.10
NULL(UNKNOWN) Rep_2696_c_2 Rep_2696_c_2_12 13088 13780 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2696_c_2 Rep_2696_c_2_13 13777 15576 - GH13_11
pfam Rep_2696_c_2 Rep_2696_c_2_14 15602 16378 - Exo_endo_phos
TC Rep_2696_c_2 Rep_2696_c_2_15 16371 18008 - 3.A.1.121.4
Gene ID: Rep_2696_c_2_8
Type: CAZyme
Location: 7565 - 9277 (-)
Gene ID: Rep_2696_c_2_9
Type: TC
Location: 9281 - 10162 (-)
Gene ID: Rep_2696_c_2_10
Type: TC
Location: 10172 - 11140 (-)
Gene ID: Rep_2696_c_2_11
Type: TC
Location: 11147 - 12727 (-)
Gene ID: Rep_2696_c_2_12
Type:
Location: 13088 - 13780 (-)
Gene ID: Rep_2696_c_2_13
Type: CAZyme
Location: 13777 - 15576 (-)
Gene ID: Rep_2696_c_2_14
Type: pfam
Location: 15602 - 16378 (-)
Gene ID: Rep_2696_c_2_15
Type: TC
Location: 16371 - 18008 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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