Cluster: Rep_2696_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2696
- CGC Family ID: CGCFAM_00859
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2696_c_122 | Rep_2696_c_122_1 | 1 | 423 | + | 3.A.1.1.47 |
| TC | Rep_2696_c_122 | Rep_2696_c_122_2 | 439 | 1293 | + | 3.A.1.1.47 |
| CAZyme | Rep_2696_c_122 | Rep_2696_c_122_3 | 1306 | 2613 | + | GH29 |
| pfam | Rep_2696_c_122 | Rep_2696_c_122_4 | 2708 | 3970 | + | GFO_IDH_MocA | GFO_IDH_MocA_C |
| CAZyme | Rep_2696_c_122 | Rep_2696_c_122_5 | 4018 | 5871 | + | GH36 |
Gene ID: Rep_2696_c_122_1
Type: TC
Location: 1 - 423 (+)
Type: TC
Location: 1 - 423 (+)
Gene ID: Rep_2696_c_122_2
Type: TC
Location: 439 - 1293 (+)
Type: TC
Location: 439 - 1293 (+)
Gene ID: Rep_2696_c_122_3
Type: CAZyme
Location: 1306 - 2613 (+)
Type: CAZyme
Location: 1306 - 2613 (+)
Gene ID: Rep_2696_c_122_4
Type: pfam
Location: 2708 - 3970 (+)
Type: pfam
Location: 2708 - 3970 (+)
Gene ID: Rep_2696_c_122_5
Type: CAZyme
Location: 4018 - 5871 (+)
Type: CAZyme
Location: 4018 - 5871 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum sp000296385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.