Cluster: Rep_2696_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2696
- CGC Family ID: CGCFAM_00074
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2696_c_112 | Rep_2696_c_112_6 | 6494 | 9034 | - | GT2 |
| CAZyme | Rep_2696_c_112 | Rep_2696_c_112_7 | 9044 | 10024 | - | GT2 |
| CAZyme | Rep_2696_c_112 | Rep_2696_c_112_8 | 10038 | 11111 | - | GT2 |
| TC | Rep_2696_c_112 | Rep_2696_c_112_9 | 11104 | 11847 | - | 3.A.1.103.1 |
| pfam | Rep_2696_c_112 | Rep_2696_c_112_10 | 11860 | 12639 | - | ABC2_membrane |
| TC | Rep_2696_c_112 | Rep_2696_c_112_11 | 12650 | 14323 | - | 9.B.97.1.2 |
Gene ID: Rep_2696_c_112_6
Type: CAZyme
Location: 6494 - 9034 (-)
Type: CAZyme
Location: 6494 - 9034 (-)
Gene ID: Rep_2696_c_112_7
Type: CAZyme
Location: 9044 - 10024 (-)
Type: CAZyme
Location: 9044 - 10024 (-)
Gene ID: Rep_2696_c_112_8
Type: CAZyme
Location: 10038 - 11111 (-)
Type: CAZyme
Location: 10038 - 11111 (-)
Gene ID: Rep_2696_c_112_9
Type: TC
Location: 11104 - 11847 (-)
Type: TC
Location: 11104 - 11847 (-)
Gene ID: Rep_2696_c_112_10
Type: pfam
Location: 11860 - 12639 (-)
Type: pfam
Location: 11860 - 12639 (-)
Gene ID: Rep_2696_c_112_11
Type: TC
Location: 12650 - 14323 (-)
Type: TC
Location: 12650 - 14323 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum sp000296385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.