Cluster: Rep_2696_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2696
- CGC Family ID: CGCFAM_02663
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2696_c_56 | Rep_2696_c_56_2 | 877 | 3570 | - | 3.A.3.4.1 |
| pfam | Rep_2696_c_56 | Rep_2696_c_56_3 | 3572 | 4570 | - | NAD_Gly3P_dh_N | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| TC | Rep_2696_c_56 | Rep_2696_c_56_4 | 4573 | 5205 | - | 9.B.31.1.2 |
| pfam | Rep_2696_c_56 | Rep_2696_c_56_5 | 5205 | 6536 | - | GTP_EFTU | GTP_EFTU | MMR_HSR1 | MMR_HSR1 | FeoB_N | FeoB_N | AIG1 | KH_dom-like |
| pfam | Rep_2696_c_56 | Rep_2696_c_56_6 | 6529 | 7899 | - | DUF512 | PDZ_6 | Radical_SAM_2 |
| CAZyme | Rep_2696_c_56 | Rep_2696_c_56_7 | 8034 | 10322 | - | GH2 |
Gene ID: Rep_2696_c_56_2
Type: TC
Location: 877 - 3570 (-)
Type: TC
Location: 877 - 3570 (-)
Gene ID: Rep_2696_c_56_3
Type: pfam
Location: 3572 - 4570 (-)
Type: pfam
Location: 3572 - 4570 (-)
Gene ID: Rep_2696_c_56_4
Type: TC
Location: 4573 - 5205 (-)
Type: TC
Location: 4573 - 5205 (-)
Gene ID: Rep_2696_c_56_5
Type: pfam
Location: 5205 - 6536 (-)
Type: pfam
Location: 5205 - 6536 (-)
Gene ID: Rep_2696_c_56_6
Type: pfam
Location: 6529 - 7899 (-)
Type: pfam
Location: 6529 - 7899 (-)
Gene ID: Rep_2696_c_56_7
Type: CAZyme
Location: 8034 - 10322 (-)
Type: CAZyme
Location: 8034 - 10322 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum sp000296385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.