Cluster: Rep_2696_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2696
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2696_c_32 | Rep_2696_c_32_1 | 2 | 646 | + | 1.C.113.1.1 |
| pfam | Rep_2696_c_32 | Rep_2696_c_32_2 | 831 | 1667 | + | Choline_bind_2 | Choline_bind_2 |
| STP | Rep_2696_c_32 | Rep_2696_c_32_3 | 1731 | 2963 | - | SBP_bac_1 |
| CAZyme | Rep_2696_c_32 | Rep_2696_c_32_4 | 2972 | 3931 | - | GH172 |
Gene ID: Rep_2696_c_32_1
Type: TC
Location: 2 - 646 (+)
Type: TC
Location: 2 - 646 (+)
Gene ID: Rep_2696_c_32_2
Type: pfam
Location: 831 - 1667 (+)
Type: pfam
Location: 831 - 1667 (+)
Gene ID: Rep_2696_c_32_3
Type: STP
Location: 1731 - 2963 (-)
Type: STP
Location: 1731 - 2963 (-)
Gene ID: Rep_2696_c_32_4
Type: CAZyme
Location: 2972 - 3931 (-)
Type: CAZyme
Location: 2972 - 3931 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum sp000296385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.