Cluster: Rep_2696_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2696
- CGC Family ID: CGCFAM_02654
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2696_c_1 | Rep_2696_c_1_9 | 10230 | 10985 | - | 3.A.1.3.14 |
| TC | Rep_2696_c_1 | Rep_2696_c_1_10 | 10992 | 11642 | - | 3.A.1.3.15 |
| TC | Rep_2696_c_1 | Rep_2696_c_1_11 | 11798 | 12643 | - | 3.A.1.3.14 |
| pfam | Rep_2696_c_1 | Rep_2696_c_1_12 | 12871 | 13800 | - | MS_channel_2nd | MS_channel_3rd | MS_channel_1st |
| CAZyme | Rep_2696_c_1 | Rep_2696_c_1_13 | 13842 | 16085 | - | CBM48 | GH13_9 |
Gene ID: Rep_2696_c_1_9
Type: TC
Location: 10230 - 10985 (-)
Type: TC
Location: 10230 - 10985 (-)
Gene ID: Rep_2696_c_1_10
Type: TC
Location: 10992 - 11642 (-)
Type: TC
Location: 10992 - 11642 (-)
Gene ID: Rep_2696_c_1_11
Type: TC
Location: 11798 - 12643 (-)
Type: TC
Location: 11798 - 12643 (-)
Gene ID: Rep_2696_c_1_12
Type: pfam
Location: 12871 - 13800 (-)
Type: pfam
Location: 12871 - 13800 (-)
Gene ID: Rep_2696_c_1_13
Type: CAZyme
Location: 13842 - 16085 (-)
Type: CAZyme
Location: 13842 - 16085 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum sp000296385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.