Cluster: Rep_2695_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2695
- CGC Family ID: CGCFAM_02654
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2695_c_16 | Rep_2695_c_16_19 | 17868 | 18623 | - | 3.A.1.3.14 |
| TC | Rep_2695_c_16 | Rep_2695_c_16_20 | 18630 | 19280 | - | 3.A.1.3.14 |
| TC | Rep_2695_c_16 | Rep_2695_c_16_21 | 19347 | 20186 | - | 3.A.1.3.5 |
| pfam | Rep_2695_c_16 | Rep_2695_c_16_22 | 20308 | 21267 | - | MS_channel_2nd | MS_channel_3rd | MS_channel_1st |
| CAZyme | Rep_2695_c_16 | Rep_2695_c_16_23 | 21267 | 23510 | - | CBM48 | GH13_9 |
Gene ID: Rep_2695_c_16_19
Type: TC
Location: 17868 - 18623 (-)
Type: TC
Location: 17868 - 18623 (-)
Gene ID: Rep_2695_c_16_20
Type: TC
Location: 18630 - 19280 (-)
Type: TC
Location: 18630 - 19280 (-)
Gene ID: Rep_2695_c_16_21
Type: TC
Location: 19347 - 20186 (-)
Type: TC
Location: 19347 - 20186 (-)
Gene ID: Rep_2695_c_16_22
Type: pfam
Location: 20308 - 21267 (-)
Type: pfam
Location: 20308 - 21267 (-)
Gene ID: Rep_2695_c_16_23
Type: CAZyme
Location: 21267 - 23510 (-)
Type: CAZyme
Location: 21267 - 23510 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum orale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.