dbCAN Logo

Cluster: Rep_2695_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2695_c_7 Rep_2695_c_7_23 25475 27262 - 8.A.59.2.1
STP Rep_2695_c_7 Rep_2695_c_7_24 27427 28686 + SBP_bac_1
TC Rep_2695_c_7 Rep_2695_c_7_25 28772 29650 + 3.A.1.1.41
TC Rep_2695_c_7 Rep_2695_c_7_26 29662 30516 + 3.A.1.1.17
CAZyme Rep_2695_c_7 Rep_2695_c_7_27 30538 31644 + GH172
STP Rep_2695_c_7 Rep_2695_c_7_28 31686 32900 + SBP_bac_1
TC Rep_2695_c_7 Rep_2695_c_7_29 32951 33661 - 1.C.113.1.3
NULL(UNKNOWN) Rep_2695_c_7 Rep_2695_c_7_30 33859 34446 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2695_c_7 Rep_2695_c_7_31 34744 36114 + 2.A.22.5.3
Gene ID: Rep_2695_c_7_23
Type: TC
Location: 25475 - 27262 (-)
Gene ID: Rep_2695_c_7_24
Type: STP
Location: 27427 - 28686 (+)
Gene ID: Rep_2695_c_7_25
Type: TC
Location: 28772 - 29650 (+)
Gene ID: Rep_2695_c_7_26
Type: TC
Location: 29662 - 30516 (+)
Gene ID: Rep_2695_c_7_27
Type: CAZyme
Location: 30538 - 31644 (+)
Gene ID: Rep_2695_c_7_28
Type: STP
Location: 31686 - 32900 (+)
Gene ID: Rep_2695_c_7_29
Type: TC
Location: 32951 - 33661 (-)
Gene ID: Rep_2695_c_7_30
Type:
Location: 33859 - 34446 (+)
Gene ID: Rep_2695_c_7_31
Type: TC
Location: 34744 - 36114 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List