Cluster: Rep_2695_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: Rep_2695
- CGC Family ID: CGCFAM_00037
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2695_c_115 | Rep_2695_c_115_3 | 1666 | 3045 | + | 3.A.1.1.27 |
| TC | Rep_2695_c_115 | Rep_2695_c_115_4 | 3048 | 3917 | + | 3.A.1.1.27 |
| CAZyme | Rep_2695_c_115 | Rep_2695_c_115_5 | 3920 | 5863 | + | GH13_14 |
| CAZyme | Rep_2695_c_115 | Rep_2695_c_115_6 | 5863 | 7122 | + | CBM34 | GH13_20 |
Gene ID: Rep_2695_c_115_3
Type: TC
Location: 1666 - 3045 (+)
Type: TC
Location: 1666 - 3045 (+)
Gene ID: Rep_2695_c_115_4
Type: TC
Location: 3048 - 3917 (+)
Type: TC
Location: 3048 - 3917 (+)
Gene ID: Rep_2695_c_115_5
Type: CAZyme
Location: 3920 - 5863 (+)
Type: CAZyme
Location: 3920 - 5863 (+)
Gene ID: Rep_2695_c_115_6
Type: CAZyme
Location: 5863 - 7122 (+)
Type: CAZyme
Location: 5863 - 7122 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum orale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.