Cluster: Rep_2695_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2695
- CGC Family ID: CGCFAM_00537
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2695_c_78 | Rep_2695_c_78_4 | 2207 | 2935 | + | 3.A.1.147.6 |
| TC | Rep_2695_c_78 | Rep_2695_c_78_5 | 2910 | 4460 | + | 3.A.1.147.6 |
| TF | Rep_2695_c_78 | Rep_2695_c_78_6 | 4526 | 5383 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2695_c_78 | Rep_2695_c_78_7 | 5553 | 8576 | + | GH2 |
| TC | Rep_2695_c_78 | Rep_2695_c_78_8 | 8601 | 9956 | + | 2.A.2.3.2 |
Gene ID: Rep_2695_c_78_4
Type: TC
Location: 2207 - 2935 (+)
Type: TC
Location: 2207 - 2935 (+)
Gene ID: Rep_2695_c_78_5
Type: TC
Location: 2910 - 4460 (+)
Type: TC
Location: 2910 - 4460 (+)
Gene ID: Rep_2695_c_78_6
Type: TF
Location: 4526 - 5383 (-)
Type: TF
Location: 4526 - 5383 (-)
Gene ID: Rep_2695_c_78_7
Type: CAZyme
Location: 5553 - 8576 (+)
Type: CAZyme
Location: 5553 - 8576 (+)
Gene ID: Rep_2695_c_78_8
Type: TC
Location: 8601 - 9956 (+)
Type: TC
Location: 8601 - 9956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum orale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.