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Cluster: Rep_2695_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2695_c_76 Rep_2695_c_76_2 321 1424 - GH170
TC Rep_2695_c_76 Rep_2695_c_76_3 1448 2797 - 4.A.3.2.6
pfam Rep_2695_c_76 Rep_2695_c_76_4 2799 3110 - PTS_IIB
STP Rep_2695_c_76 Rep_2695_c_76_5 3232 4146 - SIS
CAZyme Rep_2695_c_76 Rep_2695_c_76_6 4133 5578 - GH1
TF Rep_2695_c_76 Rep_2695_c_76_7 5599 6441 - HTH_6
TC Rep_2695_c_76 Rep_2695_c_76_8 6468 6821 - 4.A.3.2.9
STP Rep_2695_c_76 Rep_2695_c_76_9 7073 8290 + Aminotran_1_2
pfam Rep_2695_c_76 Rep_2695_c_76_10 8344 8919 - Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7
TC Rep_2695_c_76 Rep_2695_c_76_11 8912 9604 - 2.A.38.4.6
TC Rep_2695_c_76 Rep_2695_c_76_12 9624 10964 - 2.A.38.4.1
TC Rep_2695_c_76 Rep_2695_c_76_13 11023 12270 - 3.B.1.1.6
Gene ID: Rep_2695_c_76_2
Type: CAZyme
Location: 321 - 1424 (-)
Gene ID: Rep_2695_c_76_3
Type: TC
Location: 1448 - 2797 (-)
Gene ID: Rep_2695_c_76_4
Type: pfam
Location: 2799 - 3110 (-)
Gene ID: Rep_2695_c_76_5
Type: STP
Location: 3232 - 4146 (-)
Gene ID: Rep_2695_c_76_6
Type: CAZyme
Location: 4133 - 5578 (-)
Gene ID: Rep_2695_c_76_7
Type: TF
Location: 5599 - 6441 (-)
Gene ID: Rep_2695_c_76_8
Type: TC
Location: 6468 - 6821 (-)
Gene ID: Rep_2695_c_76_9
Type: STP
Location: 7073 - 8290 (+)
Gene ID: Rep_2695_c_76_10
Type: pfam
Location: 8344 - 8919 (-)
Gene ID: Rep_2695_c_76_11
Type: TC
Location: 8912 - 9604 (-)
Gene ID: Rep_2695_c_76_12
Type: TC
Location: 9624 - 10964 (-)
Gene ID: Rep_2695_c_76_13
Type: TC
Location: 11023 - 12270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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