Cluster: Rep_2695_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2695
- CGC Family ID: CGCFAM_00011
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2695_c_68 | Rep_2695_c_68_7 | 5511 | 6353 | + | GT2 |
| pfam | Rep_2695_c_68 | Rep_2695_c_68_8 | 6459 | 7469 | + | GHMP_kinases_N | GHMP_kinases_C |
| CAZyme | Rep_2695_c_68 | Rep_2695_c_68_9 | 7462 | 8499 | + | GT2 |
| TC | Rep_2695_c_68 | Rep_2695_c_68_10 | 8531 | 9319 | + | 3.A.1.103.4 |
| TC | Rep_2695_c_68 | Rep_2695_c_68_11 | 9331 | 11679 | + | 3.A.1.103.1 |
| CAZyme | Rep_2695_c_68 | Rep_2695_c_68_12 | 11752 | 12729 | + | GT2 |
Gene ID: Rep_2695_c_68_7
Type: CAZyme
Location: 5511 - 6353 (+)
Type: CAZyme
Location: 5511 - 6353 (+)
Gene ID: Rep_2695_c_68_8
Type: pfam
Location: 6459 - 7469 (+)
Type: pfam
Location: 6459 - 7469 (+)
Gene ID: Rep_2695_c_68_9
Type: CAZyme
Location: 7462 - 8499 (+)
Type: CAZyme
Location: 7462 - 8499 (+)
Gene ID: Rep_2695_c_68_10
Type: TC
Location: 8531 - 9319 (+)
Type: TC
Location: 8531 - 9319 (+)
Gene ID: Rep_2695_c_68_11
Type: TC
Location: 9331 - 11679 (+)
Type: TC
Location: 9331 - 11679 (+)
Gene ID: Rep_2695_c_68_12
Type: CAZyme
Location: 11752 - 12729 (+)
Type: CAZyme
Location: 11752 - 12729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum orale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.