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Cluster: Rep_2695_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2695_c_65 Rep_2695_c_65_3 1317 2009 - GT2
CAZyme Rep_2695_c_65 Rep_2695_c_65_4 2012 2947 - GT2
NULL(UNKNOWN) Rep_2695_c_65 Rep_2695_c_65_5 2944 4176 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_2695_c_65 Rep_2695_c_65_6 4190 5197 - ATP-grasp_3 | ATP-grasp_4 | ATPgrasp_Ter | PylC-like_N
TC Rep_2695_c_65 Rep_2695_c_65_7 5200 6627 - 2.A.66.2.23
CAZyme Rep_2695_c_65 Rep_2695_c_65_8 6627 7607 - GT2
CAZyme Rep_2695_c_65 Rep_2695_c_65_9 7616 8494 - GT2
CAZyme Rep_2695_c_65 Rep_2695_c_65_10 8504 9484 - GT8
Gene ID: Rep_2695_c_65_3
Type: CAZyme
Location: 1317 - 2009 (-)
Gene ID: Rep_2695_c_65_4
Type: CAZyme
Location: 2012 - 2947 (-)
Gene ID: Rep_2695_c_65_5
Type:
Location: 2944 - 4176 (-)
Gene ID: Rep_2695_c_65_6
Type: pfam
Location: 4190 - 5197 (-)
Gene ID: Rep_2695_c_65_7
Type: TC
Location: 5200 - 6627 (-)
Gene ID: Rep_2695_c_65_8
Type: CAZyme
Location: 6627 - 7607 (-)
Gene ID: Rep_2695_c_65_9
Type: CAZyme
Location: 7616 - 8494 (-)
Gene ID: Rep_2695_c_65_10
Type: CAZyme
Location: 8504 - 9484 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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