Cluster: Rep_2695_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2695
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2695_c_42 | Rep_2695_c_42_1 | 100 | 2688 | - | CBM13 | CBM13 |
| NULL(UNKNOWN) | Rep_2695_c_42 | Rep_2695_c_42_2 | 2990 | 4537 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2695_c_42 | Rep_2695_c_42_3 | 4654 | 5595 | - | CAP | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_3 |
| TC | Rep_2695_c_42 | Rep_2695_c_42_4 | 5883 | 7781 | - | 3.A.1.135.5 |
| TC | Rep_2695_c_42 | Rep_2695_c_42_5 | 7781 | 9526 | - | 3.A.1.135.5 |
Gene ID: Rep_2695_c_42_1
Type: CAZyme
Location: 100 - 2688 (-)
Type: CAZyme
Location: 100 - 2688 (-)
Gene ID: Rep_2695_c_42_2
Type:
Location: 2990 - 4537 (-)
Type:
Location: 2990 - 4537 (-)
Gene ID: Rep_2695_c_42_3
Type: pfam
Location: 4654 - 5595 (-)
Type: pfam
Location: 4654 - 5595 (-)
Gene ID: Rep_2695_c_42_4
Type: TC
Location: 5883 - 7781 (-)
Type: TC
Location: 5883 - 7781 (-)
Gene ID: Rep_2695_c_42_5
Type: TC
Location: 7781 - 9526 (-)
Type: TC
Location: 7781 - 9526 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoanaerobaculum
Species
Lachnoanaerobaculum orale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.