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Cluster: Rep_2695_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2695_c_24 Rep_2695_c_24_10 7542 8888 + 3.D.6.1.2
TC Rep_2695_c_24 Rep_2695_c_24_11 8888 9847 + 3.D.6.1.2
TC Rep_2695_c_24 Rep_2695_c_24_12 9844 10455 + 3.D.6.1.2
TC Rep_2695_c_24 Rep_2695_c_24_13 10465 11286 + 3.D.6.1.2
TC Rep_2695_c_24 Rep_2695_c_24_14 11286 11864 + 3.D.6.1.2
TC Rep_2695_c_24 Rep_2695_c_24_15 11875 12690 + 3.D.6.1.2
TC Rep_2695_c_24 Rep_2695_c_24_16 13278 14006 + 9.B.120.1.1
pfam Rep_2695_c_24 Rep_2695_c_24_17 14305 17418 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
CAZyme Rep_2695_c_24 Rep_2695_c_24_18 17430 19886 + GT35
Gene ID: Rep_2695_c_24_10
Type: TC
Location: 7542 - 8888 (+)
Gene ID: Rep_2695_c_24_11
Type: TC
Location: 8888 - 9847 (+)
Gene ID: Rep_2695_c_24_12
Type: TC
Location: 9844 - 10455 (+)
Gene ID: Rep_2695_c_24_13
Type: TC
Location: 10465 - 11286 (+)
Gene ID: Rep_2695_c_24_14
Type: TC
Location: 11286 - 11864 (+)
Gene ID: Rep_2695_c_24_15
Type: TC
Location: 11875 - 12690 (+)
Gene ID: Rep_2695_c_24_16
Type: TC
Location: 13278 - 14006 (+)
Gene ID: Rep_2695_c_24_17
Type: pfam
Location: 14305 - 17418 (+)
Gene ID: Rep_2695_c_24_18
Type: CAZyme
Location: 17430 - 19886 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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