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Cluster: Rep_2695_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2695_c_0 Rep_2695_c_0_14 13951 14937 - 2.A.56.1.2
NULL(UNKNOWN) Rep_2695_c_0 Rep_2695_c_0_15 14934 15401 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2695_c_0 Rep_2695_c_0_16 15615 17897 - GH65
TC Rep_2695_c_0 Rep_2695_c_0_17 17897 18718 - 3.A.1.1.11
TC Rep_2695_c_0 Rep_2695_c_0_18 18721 19629 - 3.A.1.1.25
TC Rep_2695_c_0 Rep_2695_c_0_19 19632 20861 - 3.A.1.1.40
CAZyme Rep_2695_c_0 Rep_2695_c_0_20 21122 24118 + GH2
TC Rep_2695_c_0 Rep_2695_c_0_21 24136 24996 + 2.A.7.3.47
Gene ID: Rep_2695_c_0_14
Type: TC
Location: 13951 - 14937 (-)
Gene ID: Rep_2695_c_0_15
Type:
Location: 14934 - 15401 (-)
Gene ID: Rep_2695_c_0_16
Type: CAZyme
Location: 15615 - 17897 (-)
Gene ID: Rep_2695_c_0_17
Type: TC
Location: 17897 - 18718 (-)
Gene ID: Rep_2695_c_0_18
Type: TC
Location: 18721 - 19629 (-)
Gene ID: Rep_2695_c_0_19
Type: TC
Location: 19632 - 20861 (-)
Gene ID: Rep_2695_c_0_20
Type: CAZyme
Location: 21122 - 24118 (+)
Gene ID: Rep_2695_c_0_21
Type: TC
Location: 24136 - 24996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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