Cluster: Rep_2675_CGC15
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2675
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2675_c_2 | Rep_2675_c_2_1523 | 1613119 | 1614588 | + | 2.A.66.1.33 |
| peptidase | Rep_2675_c_2 | Rep_2675_c_2_1524 | 1614642 | 1615742 | - | I87.UPW |
| TC | Rep_2675_c_2 | Rep_2675_c_2_1525 | 1616241 | 1617935 | - | 4.C.1.1.14 |
| TC | Rep_2675_c_2 | Rep_2675_c_2_1526 | 1618133 | 1619824 | - | 4.C.1.1.14 |
| CAZyme | Rep_2675_c_2 | Rep_2675_c_2_1527 | 1619983 | 1621596 | - | GH20 |
| STP | Rep_2675_c_2 | Rep_2675_c_2_1528 | 1621810 | 1622394 | + | TetR_N |
| TC | Rep_2675_c_2 | Rep_2675_c_2_1529 | 1622381 | 1623109 | + | 3.A.1.105.1 |
| pfam | Rep_2675_c_2 | Rep_2675_c_2_1530 | 1623106 | 1623837 | + | ABC2_membrane | ABC2_membrane_3 |
| pfam | Rep_2675_c_2 | Rep_2675_c_2_1531 | 1623856 | 1624470 | + | CAT |
| CAZyme | Rep_2675_c_2 | Rep_2675_c_2_1532 | 1624519 | 1625805 | - | GT32 |
Gene ID: Rep_2675_c_2_1523
Type: TC
Location: 1613119 - 1614588 (+)
Type: TC
Location: 1613119 - 1614588 (+)
Gene ID: Rep_2675_c_2_1524
Type: peptidase
Location: 1614642 - 1615742 (-)
Type: peptidase
Location: 1614642 - 1615742 (-)
Gene ID: Rep_2675_c_2_1525
Type: TC
Location: 1616241 - 1617935 (-)
Type: TC
Location: 1616241 - 1617935 (-)
Gene ID: Rep_2675_c_2_1526
Type: TC
Location: 1618133 - 1619824 (-)
Type: TC
Location: 1618133 - 1619824 (-)
Gene ID: Rep_2675_c_2_1527
Type: CAZyme
Location: 1619983 - 1621596 (-)
Type: CAZyme
Location: 1619983 - 1621596 (-)
Gene ID: Rep_2675_c_2_1528
Type: STP
Location: 1621810 - 1622394 (+)
Type: STP
Location: 1621810 - 1622394 (+)
Gene ID: Rep_2675_c_2_1529
Type: TC
Location: 1622381 - 1623109 (+)
Type: TC
Location: 1622381 - 1623109 (+)
Gene ID: Rep_2675_c_2_1530
Type: pfam
Location: 1623106 - 1623837 (+)
Type: pfam
Location: 1623106 - 1623837 (+)
Gene ID: Rep_2675_c_2_1531
Type: pfam
Location: 1623856 - 1624470 (+)
Type: pfam
Location: 1623856 - 1624470 (+)
Gene ID: Rep_2675_c_2_1532
Type: CAZyme
Location: 1624519 - 1625805 (-)
Type: CAZyme
Location: 1624519 - 1625805 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UBA1206
Species
UBA1206 sp000433115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.