Cluster: Rep_2668_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2668
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2668_c_0 | Rep_2668_c_0_386 | 414913 | 416202 | + | GH109 |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_387 | 416291 | 416683 | + | dCMP_cyt_deam_1 |
| TC | Rep_2668_c_0 | Rep_2668_c_0_388 | 416831 | 418660 | - | 3.A.1.135.5 |
| TC | Rep_2668_c_0 | Rep_2668_c_0_389 | 418653 | 420377 | - | 3.A.1.135.5 |
| TF | Rep_2668_c_0 | Rep_2668_c_0_390 | 420380 | 420817 | - | MarR |
| TC | Rep_2668_c_0 | Rep_2668_c_0_391 | 421306 | 423957 | + | 3.A.3.2.28 |
Gene ID: Rep_2668_c_0_386
Type: CAZyme
Location: 414913 - 416202 (+)
Type: CAZyme
Location: 414913 - 416202 (+)
Gene ID: Rep_2668_c_0_387
Type: pfam
Location: 416291 - 416683 (+)
Type: pfam
Location: 416291 - 416683 (+)
Gene ID: Rep_2668_c_0_388
Type: TC
Location: 416831 - 418660 (-)
Type: TC
Location: 416831 - 418660 (-)
Gene ID: Rep_2668_c_0_389
Type: TC
Location: 418653 - 420377 (-)
Type: TC
Location: 418653 - 420377 (-)
Gene ID: Rep_2668_c_0_390
Type: TF
Location: 420380 - 420817 (-)
Type: TF
Location: 420380 - 420817 (-)
Gene ID: Rep_2668_c_0_391
Type: TC
Location: 421306 - 423957 (+)
Type: TC
Location: 421306 - 423957 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS731
Species
UMGS731 sp900544985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.