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Cluster: Rep_2668_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2668_c_0 Rep_2668_c_0_375 399298 401043 + 3.A.1.135.5
TC Rep_2668_c_0 Rep_2668_c_0_376 401033 402937 + 3.A.1.135.5
STP Rep_2668_c_0 Rep_2668_c_0_377 402959 403795 + PfkB
CAZyme Rep_2668_c_0 Rep_2668_c_0_378 404210 405469 + GT2
TF Rep_2668_c_0 Rep_2668_c_0_379 406020 406718 + Trans_reg_C
STP Rep_2668_c_0 Rep_2668_c_0_380 406715 408745 + HATPase_c | HisKA
CAZyme Rep_2668_c_0 Rep_2668_c_0_381 408982 410115 + GH27
TC Rep_2668_c_0 Rep_2668_c_0_382 410361 411263 - 2.A.115.1.1
Gene ID: Rep_2668_c_0_375
Type: TC
Location: 399298 - 401043 (+)
Gene ID: Rep_2668_c_0_376
Type: TC
Location: 401033 - 402937 (+)
Gene ID: Rep_2668_c_0_377
Type: STP
Location: 402959 - 403795 (+)
Gene ID: Rep_2668_c_0_378
Type: CAZyme
Location: 404210 - 405469 (+)
Gene ID: Rep_2668_c_0_379
Type: TF
Location: 406020 - 406718 (+)
Gene ID: Rep_2668_c_0_380
Type: STP
Location: 406715 - 408745 (+)
Gene ID: Rep_2668_c_0_381
Type: CAZyme
Location: 408982 - 410115 (+)
Gene ID: Rep_2668_c_0_382
Type: TC
Location: 410361 - 411263 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS731
→
Species
UMGS731 sp900544985

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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