Cluster: Rep_2668_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2668
- CGC Family ID: CGCFAM_00060
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2668_c_0 | Rep_2668_c_0_1234 | 1299586 | 1302219 | + | 4.A.2.1.17 |
| CAZyme | Rep_2668_c_0 | Rep_2668_c_0_1235 | 1302563 | 1303402 | - | CE4 |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_1236 | 1303595 | 1304611 | + | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd |
| TC | Rep_2668_c_0 | Rep_2668_c_0_1237 | 1304796 | 1305749 | - | 3.A.1.15.3 |
Gene ID: Rep_2668_c_0_1234
Type: TC
Location: 1299586 - 1302219 (+)
Type: TC
Location: 1299586 - 1302219 (+)
Gene ID: Rep_2668_c_0_1235
Type: CAZyme
Location: 1302563 - 1303402 (-)
Type: CAZyme
Location: 1302563 - 1303402 (-)
Gene ID: Rep_2668_c_0_1236
Type: pfam
Location: 1303595 - 1304611 (+)
Type: pfam
Location: 1303595 - 1304611 (+)
Gene ID: Rep_2668_c_0_1237
Type: TC
Location: 1304796 - 1305749 (-)
Type: TC
Location: 1304796 - 1305749 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS731
Species
UMGS731 sp900544985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.