Cluster: Rep_2668_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_2668
- CGC Family ID: CGCFAM_00600
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2668_c_0 | Rep_2668_c_0_1145 | 1202723 | 1203742 | - | GT2 |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_1146 | 1203772 | 1204761 | - | Stealth_CR2 | Stealth_CR1 |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_1147 | 1204821 | 1206020 | - | Wzy_C |
| CAZyme | Rep_2668_c_0 | Rep_2668_c_0_1148 | 1206010 | 1207233 | - | GT4 |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_1149 | 1207234 | 1208520 | - | Glyco_trans_1_2 |
| CAZyme | Rep_2668_c_0 | Rep_2668_c_0_1150 | 1208522 | 1209616 | - | GT4 |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_1151 | 1209652 | 1210446 | - | Glycos_transf_2 |
| CAZyme | Rep_2668_c_0 | Rep_2668_c_0_1152 | 1210459 | 1211376 | - | GT2 |
| TC | Rep_2668_c_0 | Rep_2668_c_0_1153 | 1211392 | 1212024 | - | 9.B.18.1.2 |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_1154 | 1212135 | 1212608 | - | PglD_N |
| pfam | Rep_2668_c_0 | Rep_2668_c_0_1155 | 1212888 | 1213343 | + | DUF6548 |
| TC | Rep_2668_c_0 | Rep_2668_c_0_1156 | 1213474 | 1214784 | + | 2.A.45.1.1 |
Gene ID: Rep_2668_c_0_1145
Type: CAZyme
Location: 1202723 - 1203742 (-)
Type: CAZyme
Location: 1202723 - 1203742 (-)
Gene ID: Rep_2668_c_0_1146
Type: pfam
Location: 1203772 - 1204761 (-)
Type: pfam
Location: 1203772 - 1204761 (-)
Gene ID: Rep_2668_c_0_1147
Type: pfam
Location: 1204821 - 1206020 (-)
Type: pfam
Location: 1204821 - 1206020 (-)
Gene ID: Rep_2668_c_0_1148
Type: CAZyme
Location: 1206010 - 1207233 (-)
Type: CAZyme
Location: 1206010 - 1207233 (-)
Gene ID: Rep_2668_c_0_1149
Type: pfam
Location: 1207234 - 1208520 (-)
Type: pfam
Location: 1207234 - 1208520 (-)
Gene ID: Rep_2668_c_0_1150
Type: CAZyme
Location: 1208522 - 1209616 (-)
Type: CAZyme
Location: 1208522 - 1209616 (-)
Gene ID: Rep_2668_c_0_1151
Type: pfam
Location: 1209652 - 1210446 (-)
Type: pfam
Location: 1209652 - 1210446 (-)
Gene ID: Rep_2668_c_0_1152
Type: CAZyme
Location: 1210459 - 1211376 (-)
Type: CAZyme
Location: 1210459 - 1211376 (-)
Gene ID: Rep_2668_c_0_1153
Type: TC
Location: 1211392 - 1212024 (-)
Type: TC
Location: 1211392 - 1212024 (-)
Gene ID: Rep_2668_c_0_1154
Type: pfam
Location: 1212135 - 1212608 (-)
Type: pfam
Location: 1212135 - 1212608 (-)
Gene ID: Rep_2668_c_0_1155
Type: pfam
Location: 1212888 - 1213343 (+)
Type: pfam
Location: 1212888 - 1213343 (+)
Gene ID: Rep_2668_c_0_1156
Type: TC
Location: 1213474 - 1214784 (+)
Type: TC
Location: 1213474 - 1214784 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS731
Species
UMGS731 sp900544985
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.