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Cluster: Rep_265_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_265_c_117 Rep_265_c_117_8 12965 15772 - GH66
pfam Rep_265_c_117 Rep_265_c_117_9 15831 16712 - SusF_SusE | SusF_SusE
pfam Rep_265_c_117 Rep_265_c_117_10 16797 18146 - SusF_SusE
CAZyme Rep_265_c_117 Rep_265_c_117_11 18165 20786 - GH31_15
CAZyme Rep_265_c_117 Rep_265_c_117_12 20913 23057 - GH97
CAZyme Rep_265_c_117 Rep_265_c_117_13 23164 24588 - GH27
pfam Rep_265_c_117 Rep_265_c_117_14 24601 25785 - SusF_SusE | SusF_SusE | SusF_SusE
pfam Rep_265_c_117 Rep_265_c_117_15 25882 27618 - SusD_RagB | SusD-like_3
TC Rep_265_c_117 Rep_265_c_117_16 27641 30631 - 1.B.14.6.1
Gene ID: Rep_265_c_117_8
Type: CAZyme
Location: 12965 - 15772 (-)
Gene ID: Rep_265_c_117_9
Type: pfam
Location: 15831 - 16712 (-)
Gene ID: Rep_265_c_117_10
Type: pfam
Location: 16797 - 18146 (-)
Gene ID: Rep_265_c_117_11
Type: CAZyme
Location: 18165 - 20786 (-)
Gene ID: Rep_265_c_117_12
Type: CAZyme
Location: 20913 - 23057 (-)
Gene ID: Rep_265_c_117_13
Type: CAZyme
Location: 23164 - 24588 (-)
Gene ID: Rep_265_c_117_14
Type: pfam
Location: 24601 - 25785 (-)
Gene ID: Rep_265_c_117_15
Type: pfam
Location: 25882 - 27618 (-)
Gene ID: Rep_265_c_117_16
Type: TC
Location: 27641 - 30631 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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