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Cluster: Rep_265_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_265_c_113 Rep_265_c_113_12 13297 14328 - 9.B.33.1.1
STP Rep_265_c_113 Rep_265_c_113_13 15521 16129 + TetR_N
TC Rep_265_c_113 Rep_265_c_113_14 16308 18650 + 2.A.6.7.7
pfam Rep_265_c_113 Rep_265_c_113_15 18680 19453 + DUF1329 | DUF1329 | LolA_like
pfam Rep_265_c_113 Rep_265_c_113_16 19450 20685 + DUF1302
TC Rep_265_c_113 Rep_265_c_113_17 20879 21982 + 2.A.6.2.29
TC Rep_265_c_113 Rep_265_c_113_18 21986 25222 + 2.A.6.2.22
TC Rep_265_c_113 Rep_265_c_113_19 25346 26779 + 2.A.6.2.5
pfam Rep_265_c_113 Rep_265_c_113_20 26943 28601 - SusD_RagB | SusD-like_3
TC Rep_265_c_113 Rep_265_c_113_21 28632 31829 - 1.B.14.6.1
pfam Rep_265_c_113 Rep_265_c_113_22 32391 33731 - AAA_14 | DUF4143
STP Rep_265_c_113 Rep_265_c_113_23 34156 35172 - PfkB
TC Rep_265_c_113 Rep_265_c_113_24 35340 36503 - 2.A.1.7.17
CAZyme Rep_265_c_113 Rep_265_c_113_25 36567 38348 - GH32
CAZyme Rep_265_c_113 Rep_265_c_113_26 38373 39962 - GH32
pfam Rep_265_c_113 Rep_265_c_113_27 39973 41367 - DUF4960
pfam Rep_265_c_113 Rep_265_c_113_28 41392 43149 - SusD_RagB | SusD-like_3
TC Rep_265_c_113 Rep_265_c_113_29 43195 46338 - 1.B.14.6.1
Gene ID: Rep_265_c_113_12
Type: TC
Location: 13297 - 14328 (-)
Gene ID: Rep_265_c_113_13
Type: STP
Location: 15521 - 16129 (+)
Gene ID: Rep_265_c_113_14
Type: TC
Location: 16308 - 18650 (+)
Gene ID: Rep_265_c_113_15
Type: pfam
Location: 18680 - 19453 (+)
Gene ID: Rep_265_c_113_16
Type: pfam
Location: 19450 - 20685 (+)
Gene ID: Rep_265_c_113_17
Type: TC
Location: 20879 - 21982 (+)
Gene ID: Rep_265_c_113_18
Type: TC
Location: 21986 - 25222 (+)
Gene ID: Rep_265_c_113_19
Type: TC
Location: 25346 - 26779 (+)
Gene ID: Rep_265_c_113_20
Type: pfam
Location: 26943 - 28601 (-)
Gene ID: Rep_265_c_113_21
Type: TC
Location: 28632 - 31829 (-)
Gene ID: Rep_265_c_113_22
Type: pfam
Location: 32391 - 33731 (-)
Gene ID: Rep_265_c_113_23
Type: STP
Location: 34156 - 35172 (-)
Gene ID: Rep_265_c_113_24
Type: TC
Location: 35340 - 36503 (-)
Gene ID: Rep_265_c_113_25
Type: CAZyme
Location: 36567 - 38348 (-)
Gene ID: Rep_265_c_113_26
Type: CAZyme
Location: 38373 - 39962 (-)
Gene ID: Rep_265_c_113_27
Type: pfam
Location: 39973 - 41367 (-)
Gene ID: Rep_265_c_113_28
Type: pfam
Location: 41392 - 43149 (-)
Gene ID: Rep_265_c_113_29
Type: TC
Location: 43195 - 46338 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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