Cluster: Rep_265_CGC14
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: Rep_265
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_265_c_104 | Rep_265_c_104_3 | 1288 | 2721 | - | 2.A.50.2.1 |
| CAZyme | Rep_265_c_104 | Rep_265_c_104_4 | 3058 | 4026 | - | GT2 |
| pfam | Rep_265_c_104 | Rep_265_c_104_5 | 4313 | 5863 | - | PDDEXK_9 | AAA-ATPase_like |
| NULL(UNKNOWN) | Rep_265_c_104 | Rep_265_c_104_6 | 6083 | 6175 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_265_c_104 | Rep_265_c_104_7 | 6234 | 7313 | - | GT4 |
| pfam | Rep_265_c_104 | Rep_265_c_104_8 | 7310 | 8020 | - | PS_pyruv_trans |
| NULL(UNKNOWN) | Rep_265_c_104 | Rep_265_c_104_9 | 8010 | 8261 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_265_c_104 | Rep_265_c_104_10 | 8278 | 9420 | - | GT4 |
| pfam | Rep_265_c_104 | Rep_265_c_104_11 | 9425 | 10633 | - | Wzy_C |
| CAZyme | Rep_265_c_104 | Rep_265_c_104_12 | 10688 | 11848 | - | GT4 |
| pfam | Rep_265_c_104 | Rep_265_c_104_13 | 11857 | 12795 | - | GINT1_N |
| CAZyme | Rep_265_c_104 | Rep_265_c_104_14 | 12830 | 13963 | - | GT4 |
| pfam | Rep_265_c_104 | Rep_265_c_104_15 | 13963 | 14982 | - | Acyl_transf_3 |
| pfam | Rep_265_c_104 | Rep_265_c_104_16 | 14979 | 16199 | - | Glyphos_transf |
| CAZyme | Rep_265_c_104 | Rep_265_c_104_17 | 16237 | 17244 | - | GT2 |
Gene ID: Rep_265_c_104_3
Type: TC
Location: 1288 - 2721 (-)
Type: TC
Location: 1288 - 2721 (-)
Gene ID: Rep_265_c_104_4
Type: CAZyme
Location: 3058 - 4026 (-)
Type: CAZyme
Location: 3058 - 4026 (-)
Gene ID: Rep_265_c_104_5
Type: pfam
Location: 4313 - 5863 (-)
Type: pfam
Location: 4313 - 5863 (-)
Gene ID: Rep_265_c_104_6
Type:
Location: 6083 - 6175 (-)
Type:
Location: 6083 - 6175 (-)
Gene ID: Rep_265_c_104_7
Type: CAZyme
Location: 6234 - 7313 (-)
Type: CAZyme
Location: 6234 - 7313 (-)
Gene ID: Rep_265_c_104_8
Type: pfam
Location: 7310 - 8020 (-)
Type: pfam
Location: 7310 - 8020 (-)
Gene ID: Rep_265_c_104_9
Type:
Location: 8010 - 8261 (-)
Type:
Location: 8010 - 8261 (-)
Gene ID: Rep_265_c_104_10
Type: CAZyme
Location: 8278 - 9420 (-)
Type: CAZyme
Location: 8278 - 9420 (-)
Gene ID: Rep_265_c_104_11
Type: pfam
Location: 9425 - 10633 (-)
Type: pfam
Location: 9425 - 10633 (-)
Gene ID: Rep_265_c_104_12
Type: CAZyme
Location: 10688 - 11848 (-)
Type: CAZyme
Location: 10688 - 11848 (-)
Gene ID: Rep_265_c_104_13
Type: pfam
Location: 11857 - 12795 (-)
Type: pfam
Location: 11857 - 12795 (-)
Gene ID: Rep_265_c_104_14
Type: CAZyme
Location: 12830 - 13963 (-)
Type: CAZyme
Location: 12830 - 13963 (-)
Gene ID: Rep_265_c_104_15
Type: pfam
Location: 13963 - 14982 (-)
Type: pfam
Location: 13963 - 14982 (-)
Gene ID: Rep_265_c_104_16
Type: pfam
Location: 14979 - 16199 (-)
Type: pfam
Location: 14979 - 16199 (-)
Gene ID: Rep_265_c_104_17
Type: CAZyme
Location: 16237 - 17244 (-)
Type: CAZyme
Location: 16237 - 17244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.