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Cluster: Rep_265_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_265_c_85 Rep_265_c_85_1 1 1314 + 3.A.16.1.2
pfam Rep_265_c_85 Rep_265_c_85_2 1311 2168 + CTP_transf_1
CAZyme Rep_265_c_85 Rep_265_c_85_3 2238 3194 + GH5_2
CAZyme Rep_265_c_85 Rep_265_c_85_4 3407 4558 - GT19
pfam Rep_265_c_85 Rep_265_c_85_5 4593 5360 - SurE
TC Rep_265_c_85 Rep_265_c_85_6 5517 6278 + 8.A.3.2.3
pfam Rep_265_c_85 Rep_265_c_85_7 6297 7190 + ParBc | HTH_ParB | ParB_dimer
pfam Rep_265_c_85 Rep_265_c_85_8 7203 7976 + DUF5683
CAZyme Rep_265_c_85 Rep_265_c_85_9 8073 9359 + GH23
Gene ID: Rep_265_c_85_1
Type: TC
Location: 1 - 1314 (+)
Gene ID: Rep_265_c_85_2
Type: pfam
Location: 1311 - 2168 (+)
Gene ID: Rep_265_c_85_3
Type: CAZyme
Location: 2238 - 3194 (+)
Gene ID: Rep_265_c_85_4
Type: CAZyme
Location: 3407 - 4558 (-)
Gene ID: Rep_265_c_85_5
Type: pfam
Location: 4593 - 5360 (-)
Gene ID: Rep_265_c_85_6
Type: TC
Location: 5517 - 6278 (+)
Gene ID: Rep_265_c_85_7
Type: pfam
Location: 6297 - 7190 (+)
Gene ID: Rep_265_c_85_8
Type: pfam
Location: 7203 - 7976 (+)
Gene ID: Rep_265_c_85_9
Type: CAZyme
Location: 8073 - 9359 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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