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Cluster: Rep_2658_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2658_c_0 Rep_2658_c_0_377 476152 477504 + 3.D.6.1.2
TC Rep_2658_c_0 Rep_2658_c_0_378 477519 478496 + 3.D.6.1.2
pfam Rep_2658_c_0 Rep_2658_c_0_379 478483 479181 + FMN_bind
TC Rep_2658_c_0 Rep_2658_c_0_380 479178 479807 + 3.D.6.1.2
TC Rep_2658_c_0 Rep_2658_c_0_381 479807 480397 + 3.D.6.1.2
TC Rep_2658_c_0 Rep_2658_c_0_382 480421 481050 + 3.D.6.1.3
CAZyme Rep_2658_c_0 Rep_2658_c_0_383 481675 487839 + CBM67 | GH78
Gene ID: Rep_2658_c_0_377
Type: TC
Location: 476152 - 477504 (+)
Gene ID: Rep_2658_c_0_378
Type: TC
Location: 477519 - 478496 (+)
Gene ID: Rep_2658_c_0_379
Type: pfam
Location: 478483 - 479181 (+)
Gene ID: Rep_2658_c_0_380
Type: TC
Location: 479178 - 479807 (+)
Gene ID: Rep_2658_c_0_381
Type: TC
Location: 479807 - 480397 (+)
Gene ID: Rep_2658_c_0_382
Type: TC
Location: 480421 - 481050 (+)
Gene ID: Rep_2658_c_0_383
Type: CAZyme
Location: 481675 - 487839 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
UMGS882
→
Species
UMGS882 sp900546385

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2658_c_0_382 vegetarian > vegan 1.54617 0.03687

🧭 Explore Read Mapping of CGC

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