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Cluster: Rep_2658_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2658_c_0 Rep_2658_c_0_358 450682 452004 + GH4
TC Rep_2658_c_0 Rep_2658_c_0_359 452082 453851 - 3.A.1.135.5
TC Rep_2658_c_0 Rep_2658_c_0_360 453835 455625 - 3.A.1.135.5
Gene ID: Rep_2658_c_0_358
Type: CAZyme
Location: 450682 - 452004 (+)
Gene ID: Rep_2658_c_0_359
Type: TC
Location: 452082 - 453851 (-)
Gene ID: Rep_2658_c_0_360
Type: TC
Location: 453835 - 455625 (-)

Taxonomic Lineage

Domain
Bacteria
Family
CAG-382
Genus
UMGS882

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_2658_c_0_359 vegetarian > vegan 1.04999 0.03687

🧭 Explore Read Mapping of CGC

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