Cluster: Rep_2658_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2658
- CGC Family ID: CGCFAM_11131
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_266 | 308757 | 309791 | + | GH179 |
| TF | Rep_2658_c_0 | Rep_2658_c_0_267 | 310003 | 310851 | - | HTH_AraC | HTH_AraC |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_268 | 311078 | 311965 | + | EamA |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_269 | 312015 | 313040 | + | GH109 |
| NULL(UNKNOWN) | Rep_2658_c_0 | Rep_2658_c_0_270 | 313290 | 315107 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_2658_c_0 | Rep_2658_c_0_271 | 315374 | 316492 | - | C110.UPW |
| TC | Rep_2658_c_0 | Rep_2658_c_0_272 | 316561 | 317925 | - | 2.A.22.5.3 |
Gene ID: Rep_2658_c_0_266
Type: CAZyme
Location: 308757 - 309791 (+)
Type: CAZyme
Location: 308757 - 309791 (+)
Gene ID: Rep_2658_c_0_267
Type: TF
Location: 310003 - 310851 (-)
Type: TF
Location: 310003 - 310851 (-)
Gene ID: Rep_2658_c_0_268
Type: pfam
Location: 311078 - 311965 (+)
Type: pfam
Location: 311078 - 311965 (+)
Gene ID: Rep_2658_c_0_269
Type: CAZyme
Location: 312015 - 313040 (+)
Type: CAZyme
Location: 312015 - 313040 (+)
Gene ID: Rep_2658_c_0_270
Type:
Location: 313290 - 315107 (+)
Type:
Location: 313290 - 315107 (+)
Gene ID: Rep_2658_c_0_271
Type: peptidase
Location: 315374 - 316492 (-)
Type: peptidase
Location: 315374 - 316492 (-)
Gene ID: Rep_2658_c_0_272
Type: TC
Location: 316561 - 317925 (-)
Type: TC
Location: 316561 - 317925 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.