Cluster: Rep_2658_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2658
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2658_c_0 | Rep_2658_c_0_184 | 196559 | 197146 | - | 2.A.107.1.2 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_185 | 197340 | 198623 | + | tRNA-synt_2b | Seryl_tRNA_N |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_186 | 198679 | 199836 | + | GH179 |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_187 | 199990 | 201165 | + | GH179 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_188 | 201285 | 201764 | + | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_189 | 201950 | 203158 | + | 9.B.10.1.1 |
Gene ID: Rep_2658_c_0_184
Type: TC
Location: 196559 - 197146 (-)
Type: TC
Location: 196559 - 197146 (-)
Gene ID: Rep_2658_c_0_185
Type: pfam
Location: 197340 - 198623 (+)
Type: pfam
Location: 197340 - 198623 (+)
Gene ID: Rep_2658_c_0_186
Type: CAZyme
Location: 198679 - 199836 (+)
Type: CAZyme
Location: 198679 - 199836 (+)
Gene ID: Rep_2658_c_0_187
Type: CAZyme
Location: 199990 - 201165 (+)
Type: CAZyme
Location: 199990 - 201165 (+)
Gene ID: Rep_2658_c_0_188
Type: pfam
Location: 201285 - 201764 (+)
Type: pfam
Location: 201285 - 201764 (+)
Gene ID: Rep_2658_c_0_189
Type: TC
Location: 201950 - 203158 (+)
Type: TC
Location: 201950 - 203158 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.