Cluster: Rep_2658_CGC36
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2658
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2658_c_0 | Rep_2658_c_0_2430 | 2952494 | 2953666 | + | 2.A.4.7.2 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_2431 | 2953693 | 2953896 | + | DUF6472 |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_2432 | 2953952 | 2954815 | - | DUF362 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_2433 | 2955005 | 2955892 | + | 3.A.1.3.10 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_2434 | 2956040 | 2956744 | + | 3.A.1.3.15 |
| TC | Rep_2658_c_0 | Rep_2658_c_0_2435 | 2956760 | 2957542 | + | 3.A.1.3.6 |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_2436 | 2957649 | 2961881 | - | SLH |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_2437 | 2962179 | 2964158 | + | ADP_ribosyl_GH |
| pfam | Rep_2658_c_0 | Rep_2658_c_0_2438 | 2964155 | 2965348 | - | FAD_oxidored |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_2439 | 2965486 | 2966313 | - | CE6 |
| CAZyme | Rep_2658_c_0 | Rep_2658_c_0_2440 | 2966407 | 2967681 | - | GH18 |
Gene ID: Rep_2658_c_0_2430
Type: TC
Location: 2952494 - 2953666 (+)
Type: TC
Location: 2952494 - 2953666 (+)
Gene ID: Rep_2658_c_0_2431
Type: pfam
Location: 2953693 - 2953896 (+)
Type: pfam
Location: 2953693 - 2953896 (+)
Gene ID: Rep_2658_c_0_2432
Type: pfam
Location: 2953952 - 2954815 (-)
Type: pfam
Location: 2953952 - 2954815 (-)
Gene ID: Rep_2658_c_0_2433
Type: TC
Location: 2955005 - 2955892 (+)
Type: TC
Location: 2955005 - 2955892 (+)
Gene ID: Rep_2658_c_0_2434
Type: TC
Location: 2956040 - 2956744 (+)
Type: TC
Location: 2956040 - 2956744 (+)
Gene ID: Rep_2658_c_0_2435
Type: TC
Location: 2956760 - 2957542 (+)
Type: TC
Location: 2956760 - 2957542 (+)
Gene ID: Rep_2658_c_0_2436
Type: CAZyme
Location: 2957649 - 2961881 (-)
Type: CAZyme
Location: 2957649 - 2961881 (-)
Gene ID: Rep_2658_c_0_2437
Type: pfam
Location: 2962179 - 2964158 (+)
Type: pfam
Location: 2962179 - 2964158 (+)
Gene ID: Rep_2658_c_0_2438
Type: pfam
Location: 2964155 - 2965348 (-)
Type: pfam
Location: 2964155 - 2965348 (-)
Gene ID: Rep_2658_c_0_2439
Type: CAZyme
Location: 2965486 - 2966313 (-)
Type: CAZyme
Location: 2965486 - 2966313 (-)
Gene ID: Rep_2658_c_0_2440
Type: CAZyme
Location: 2966407 - 2967681 (-)
Type: CAZyme
Location: 2966407 - 2967681 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UMGS882
Species
UMGS882 sp900546385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2658_c_0_2433 | vegetarian > vegan | 1.23002 | 0.03687 |